IFIT1 / TRP channels
Name: Interferon-induced protein with tetratricopeptide repeats 1
(IFIT1)
Official Symbol: IFIT1
provided by HGNC
Function:
Interferon-induced antiviral RNA-binding protein that specifically binds single-stranded RNA bearing a 5'-triphosphate group (PPP-RNA), thereby acting as a sensor of viral single-stranded RNAs and inhibiting expression of viral messenger RNAs. Single-stranded PPP-RNAs, which lack 2'-O-methylation of the 5' cap and bear a 5'-triphosphate group instead, are specific from viruses, providing a molecular signature to distinguish between self and non-self mRNAs by the host during viral infection. Directly binds PPP-RNA in a non-sequence-specific manner. Viruses evolved several ways to evade this restriction system such as encoding their own 2'-O-methylase for their mRNAs or by stealing host cap containing the 2'-O-methylation (cap snatching mechanism). Exhibits antiviral activity against several viruses including human papilloma and hepatitis C viruses.
Source: Reorganizing the protein space at the Universal Protein Resource (UniProt)
Nucleic Acids Res. 40: D71-D75 (2012).
Species |
External DB
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Entrez Gene | UniprotKB | DIP | IntAct | MINT | BioGRID | STRING | IUPHAR-DB | KEGG | OMIM | |
Human
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3434![]() |
P09914![]() |
DIP-37898N![]() |
P09914![]() |
MINT-153827![]() |
109659![]() |
P09914![]() |
hsa:3434![]() |
147690![]() |
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Mouse
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15957![]() |
Q64282![]() |
200525![]() |
Q64282![]() |
mmu:15957![]() |
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Rat
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56824![]() |
Q9JJT1![]() |
248597![]() |
Q9JJT1![]() |
rno:56824![]() |
PPI pairs:
Biological Process:
- GO:0071360
: cellular response to exogenous dsRNA
- GO:0051607
: defense response to virus
- GO:0019060
: intracellular transport of viral proteins in host cell
- GO:0050689
: negative regulation of defense response to virus by host
- GO:0051097
: negative regulation of helicase activity
- GO:0032091
: negative regulation of protein binding
- GO:0045071
: negative regulation of viral genome replication
- GO:0045070
: positive regulation of viral genome replication
- GO:0009615
: response to virus
- GO:0060337
: type I interferon-mediated signaling pathway
Source: The Gene Ontology Consortium. Gene ontology: tool for the unification of biology. Nat. Genet.. May 2000;25(1):25-9.
World Wide Web URL: http://www.geneontology.org/
World Wide Web URL: http://www.geneontology.org/
Disease:
No information in OMIM
Source: Online Mendelian Inheritance in Man, OMIM®. McKusick-Nathans Institute of Genetic Medicine,
Johns Hopkins University (Baltimore, MD), May, 2012.
World Wide Web URL: http://omim.org/
World Wide Web URL: http://omim.org/
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Screening
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Experimental screening | Non-experimental screening | Reference | ||||||||
TRP channel construct | Interactor source | |||||||||
TRP channel | Interactor | Method | Species | Region | Species | Organ/tissue | Sample type | |||
TRPP1 |
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IFIT1 | Affinity purification-mass spectrometry | Mouse | Not specified | Mouse | Vascular smooth muscle | MOVAS lysates | 19879844 |
(
:
click the arrow icon to show interactions only between the corresponding TRP channel and the interactor)
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