IFIT1 / TRP channels
Name: Interferon-induced protein with tetratricopeptide repeats 1
(IFIT1)
Official Symbol: IFIT1
provided by HGNC
Function:
Interferon-induced antiviral RNA-binding protein that specifically binds single-stranded RNA bearing a 5'-triphosphate group (PPP-RNA), thereby acting as a sensor of viral single-stranded RNAs and inhibiting expression of viral messenger RNAs. Single-stranded PPP-RNAs, which lack 2'-O-methylation of the 5' cap and bear a 5'-triphosphate group instead, are specific from viruses, providing a molecular signature to distinguish between self and non-self mRNAs by the host during viral infection. Directly binds PPP-RNA in a non-sequence-specific manner. Viruses evolved several ways to evade this restriction system such as encoding their own 2'-O-methylase for their mRNAs or by stealing host cap containing the 2'-O-methylation (cap snatching mechanism). Exhibits antiviral activity against several viruses including human papilloma and hepatitis C viruses.
Source: Reorganizing the protein space at the Universal Protein Resource (UniProt)
Nucleic Acids Res. 40: D71-D75 (2012).
Species | External DB | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
Entrez Gene | UniprotKB | DIP | IntAct | MINT | BioGRID | STRING | IUPHAR-DB | KEGG | OMIM | |
Human
|
3434 | P09914 | DIP-37898N | P09914 | MINT-153827 | 109659 | P09914 | hsa:3434 | 147690 | |
Mouse
|
15957 | Q64282 | 200525 | Q64282 | mmu:15957 | |||||
Rat
|
56824 | Q9JJT1 | 248597 | Q9JJT1 | rno:56824 |
PPI pairs:
Biological Process:
- GO:0071360 : cellular response to exogenous dsRNA
- GO:0051607 : defense response to virus
- GO:0019060 : intracellular transport of viral proteins in host cell
- GO:0050689 : negative regulation of defense response to virus by host
- GO:0051097 : negative regulation of helicase activity
- GO:0032091 : negative regulation of protein binding
- GO:0045071 : negative regulation of viral genome replication
- GO:0045070 : positive regulation of viral genome replication
- GO:0009615 : response to virus
- GO:0060337 : type I interferon-mediated signaling pathway
Source: The Gene Ontology Consortium. Gene ontology: tool for the unification of biology. Nat. Genet.. May 2000;25(1):25-9.
World Wide Web URL: http://www.geneontology.org/
World Wide Web URL: http://www.geneontology.org/
Disease:
No information in OMIM
Source: Online Mendelian Inheritance in Man, OMIM®. McKusick-Nathans Institute of Genetic Medicine,
Johns Hopkins University (Baltimore, MD), May, 2012.
World Wide Web URL: http://omim.org/
World Wide Web URL: http://omim.org/
Screening Validation: In vitro validation Validation: In vivo validation Characterization Functional consequence | top |
Screening | ||||||||||
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Experimental screening | Non-experimental screening | Reference | ||||||||
TRP channel construct | Interactor source | |||||||||
TRP channel | Interactor | Method | Species | Region | Species | Organ/tissue | Sample type | |||
TRPP1 | IFIT1 | Affinity purification-mass spectrometry | Mouse | Not specified | Mouse | Vascular smooth muscle | MOVAS lysates | 19879844 |
(:
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