TRF2 / TRP channels
Name: Telomeric repeat-binding factor 2
(TRF2)
Official Symbol: TERF2
provided by HGNC
Function:
Binds the telomeric double-stranded 5'-TTAGGG-3' repeat and plays a central role in telomere maintenance and protection against end-to-end fusion of chromosomes. In addition to its telomeric DNA-binding role, required to recruit a number of factors and enzymes required for telomere protection, including the shelterin complex, TERF2IP/RAP1 and DCLRE1B/Apollo. Component of the shelterin complex (telosome) that is involved in the regulation of telomere length and protection. Shelterin associates with arrays of double-stranded 5'-TTAGGG-3' repeats added by telomerase and protects chromosome ends; without its protective activity, telomeres are no longer hidden from the DNA damage surveillance and chromosome ends are inappropriately processed by DNA repair pathways. Together with DCLRE1B/Apollo, plays a key role in telomeric loop (T loop) formation by generating 3' single-stranded overhang at the leading end telomeres: T loops have been proposed to protect chromosome ends from degradation and repair. Required both to recruit DCLRE1B/Apollo to telomeres and activate the exonuclease activity of DCLRE1B/Apollo. Preferentially binds to positive supercoiled DNA. Together with DCLRE1B/Apollo, required to control the amount of DNA topoisomerase (TOP1, TOP2A and TOP2B) needed for telomere replication during fork passage and prevent aberrant telomere topology. Recruits TERF2IP/RAP1 to telomeres, thereby participating in to repressing homology-directed repair (HDR), which can affect telomere length.
Source: Reorganizing the protein space at the Universal Protein Resource (UniProt)
Nucleic Acids Res. 40: D71-D75 (2012).
| Species |
External DB
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|---|---|---|---|---|---|---|---|---|---|---|
| Entrez Gene | UniprotKB | DIP | IntAct | MINT | BioGRID | STRING | IUPHAR-DB | KEGG | OMIM | |
Human
|
7014 |
Q15554 |
DIP-34052N |
Q15554 |
MINT-2831307 |
112873 |
Q15554 |
hsa:7014 |
602027 |
|
Mouse
|
21750 |
O35144 |
MINT-4137455 |
204117 |
O35144 |
mmu:21750 |
||||
Rat
|
361403 |
B1H237 |
262652 |
B1H237 |
rno:361403 |
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PPI pairs:
Biological Process:
- GO:0001309
: age-dependent telomere shortening - GO:0007049
: cell cycle - GO:0090398
: cellular senescence - GO:0001701
: in utero embryonic development - GO:0032214
: negative regulation of telomere maintenance via semi-conservative replication - GO:0032206
: positive regulation of telomere maintenance - GO:0031848
: protection from non-homologous end joining at telomere - GO:0070198
: protein localization to chromosome, telomeric region - GO:0007004
: telomere maintenance via telomerase - GO:0031627
: telomeric loop formation
Source: The Gene Ontology Consortium. Gene ontology: tool for the unification of biology. Nat. Genet.. May 2000;25(1):25-9.
World Wide Web URL: http://www.geneontology.org/
World Wide Web URL: http://www.geneontology.org/
Disease:
No information in OMIM
Source: Online Mendelian Inheritance in Man, OMIM®. McKusick-Nathans Institute of Genetic Medicine,
Johns Hopkins University (Baltimore, MD), May, 2012.
World Wide Web URL: http://omim.org/
World Wide Web URL: http://omim.org/
Screening
Validation: In vitro validation
Validation: In vivo validation
Characterization
Functional consequence
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top
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Screening
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| Experimental screening | Non-experimental screening | Reference | ||||||||
| TRP channel construct | Interactor source | |||||||||
| TRP channel | Interactor | Method | Species | Region | Species | Organ/tissue | Sample type | |||
| TRPC5 |
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TRF2 | Affinity purification-mass spectrometry | Not used as a bait | Human | HEK293T | Cell lystaes | 20811636 | ||
(
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:
click the arrow icon to show interactions only between the corresponding TRP channel and the interactor)







Screening