TRF2 / TRP channels
Name: Telomeric repeat-binding factor 2
(TRF2)
Official Symbol: TERF2
provided by HGNC
Function:
Binds the telomeric double-stranded 5'-TTAGGG-3' repeat and plays a central role in telomere maintenance and protection against end-to-end fusion of chromosomes. In addition to its telomeric DNA-binding role, required to recruit a number of factors and enzymes required for telomere protection, including the shelterin complex, TERF2IP/RAP1 and DCLRE1B/Apollo. Component of the shelterin complex (telosome) that is involved in the regulation of telomere length and protection. Shelterin associates with arrays of double-stranded 5'-TTAGGG-3' repeats added by telomerase and protects chromosome ends; without its protective activity, telomeres are no longer hidden from the DNA damage surveillance and chromosome ends are inappropriately processed by DNA repair pathways. Together with DCLRE1B/Apollo, plays a key role in telomeric loop (T loop) formation by generating 3' single-stranded overhang at the leading end telomeres: T loops have been proposed to protect chromosome ends from degradation and repair. Required both to recruit DCLRE1B/Apollo to telomeres and activate the exonuclease activity of DCLRE1B/Apollo. Preferentially binds to positive supercoiled DNA. Together with DCLRE1B/Apollo, required to control the amount of DNA topoisomerase (TOP1, TOP2A and TOP2B) needed for telomere replication during fork passage and prevent aberrant telomere topology. Recruits TERF2IP/RAP1 to telomeres, thereby participating in to repressing homology-directed repair (HDR), which can affect telomere length.
Source: Reorganizing the protein space at the Universal Protein Resource (UniProt)
Nucleic Acids Res. 40: D71-D75 (2012).
Species |
External DB
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Entrez Gene | UniprotKB | DIP | IntAct | MINT | BioGRID | STRING | IUPHAR-DB | KEGG | OMIM | |
Human
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7014![]() |
Q15554![]() |
DIP-34052N![]() |
Q15554![]() |
MINT-2831307![]() |
112873![]() |
Q15554![]() |
hsa:7014![]() |
602027![]() |
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Mouse
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21750![]() |
O35144![]() |
MINT-4137455![]() |
204117![]() |
O35144![]() |
mmu:21750![]() |
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Rat
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361403![]() |
B1H237![]() |
262652![]() |
B1H237![]() |
rno:361403![]() |
PPI pairs:
Biological Process:
- GO:0001309
: age-dependent telomere shortening
- GO:0007049
: cell cycle
- GO:0090398
: cellular senescence
- GO:0001701
: in utero embryonic development
- GO:0032214
: negative regulation of telomere maintenance via semi-conservative replication
- GO:0032206
: positive regulation of telomere maintenance
- GO:0031848
: protection from non-homologous end joining at telomere
- GO:0070198
: protein localization to chromosome, telomeric region
- GO:0007004
: telomere maintenance via telomerase
- GO:0031627
: telomeric loop formation
Source: The Gene Ontology Consortium. Gene ontology: tool for the unification of biology. Nat. Genet.. May 2000;25(1):25-9.
World Wide Web URL: http://www.geneontology.org/
World Wide Web URL: http://www.geneontology.org/
Disease:
No information in OMIM
Source: Online Mendelian Inheritance in Man, OMIM®. McKusick-Nathans Institute of Genetic Medicine,
Johns Hopkins University (Baltimore, MD), May, 2012.
World Wide Web URL: http://omim.org/
World Wide Web URL: http://omim.org/
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Screening
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Experimental screening | Non-experimental screening | Reference | ||||||||
TRP channel construct | Interactor source | |||||||||
TRP channel | Interactor | Method | Species | Region | Species | Organ/tissue | Sample type | |||
TRPC5 |
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TRF2 | Affinity purification-mass spectrometry | Not used as a bait | Human | HEK293T | Cell lystaes | 20811636 |
(
:
click the arrow icon to show interactions only between the corresponding TRP channel and the interactor)
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