TRF2 / TRP channels
Name: Telomeric repeat-binding factor 2
(TRF2)
Official Symbol: TERF2
provided by HGNC
Function:
Binds the telomeric double-stranded 5'-TTAGGG-3' repeat and plays a central role in telomere maintenance and protection against end-to-end fusion of chromosomes. In addition to its telomeric DNA-binding role, required to recruit a number of factors and enzymes required for telomere protection, including the shelterin complex, TERF2IP/RAP1 and DCLRE1B/Apollo. Component of the shelterin complex (telosome) that is involved in the regulation of telomere length and protection. Shelterin associates with arrays of double-stranded 5'-TTAGGG-3' repeats added by telomerase and protects chromosome ends; without its protective activity, telomeres are no longer hidden from the DNA damage surveillance and chromosome ends are inappropriately processed by DNA repair pathways. Together with DCLRE1B/Apollo, plays a key role in telomeric loop (T loop) formation by generating 3' single-stranded overhang at the leading end telomeres: T loops have been proposed to protect chromosome ends from degradation and repair. Required both to recruit DCLRE1B/Apollo to telomeres and activate the exonuclease activity of DCLRE1B/Apollo. Preferentially binds to positive supercoiled DNA. Together with DCLRE1B/Apollo, required to control the amount of DNA topoisomerase (TOP1, TOP2A and TOP2B) needed for telomere replication during fork passage and prevent aberrant telomere topology. Recruits TERF2IP/RAP1 to telomeres, thereby participating in to repressing homology-directed repair (HDR), which can affect telomere length.
Source: Reorganizing the protein space at the Universal Protein Resource (UniProt)
Nucleic Acids Res. 40: D71-D75 (2012).
Species | External DB | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
Entrez Gene | UniprotKB | DIP | IntAct | MINT | BioGRID | STRING | IUPHAR-DB | KEGG | OMIM | |
Human
|
7014 | Q15554 | DIP-34052N | Q15554 | MINT-2831307 | 112873 | Q15554 | hsa:7014 | 602027 | |
Mouse
|
21750 | O35144 | MINT-4137455 | 204117 | O35144 | mmu:21750 | ||||
Rat
|
361403 | B1H237 | 262652 | B1H237 | rno:361403 |
PPI pairs:
Biological Process:
- GO:0001309 : age-dependent telomere shortening
- GO:0007049 : cell cycle
- GO:0090398 : cellular senescence
- GO:0001701 : in utero embryonic development
- GO:0032214 : negative regulation of telomere maintenance via semi-conservative replication
- GO:0032206 : positive regulation of telomere maintenance
- GO:0031848 : protection from non-homologous end joining at telomere
- GO:0070198 : protein localization to chromosome, telomeric region
- GO:0007004 : telomere maintenance via telomerase
- GO:0031627 : telomeric loop formation
Source: The Gene Ontology Consortium. Gene ontology: tool for the unification of biology. Nat. Genet.. May 2000;25(1):25-9.
World Wide Web URL: http://www.geneontology.org/
World Wide Web URL: http://www.geneontology.org/
Disease:
No information in OMIM
Source: Online Mendelian Inheritance in Man, OMIM®. McKusick-Nathans Institute of Genetic Medicine,
Johns Hopkins University (Baltimore, MD), May, 2012.
World Wide Web URL: http://omim.org/
World Wide Web URL: http://omim.org/
Screening Validation: In vitro validation Validation: In vivo validation Characterization Functional consequence | top |
Screening | ||||||||||
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Experimental screening | Non-experimental screening | Reference | ||||||||
TRP channel construct | Interactor source | |||||||||
TRP channel | Interactor | Method | Species | Region | Species | Organ/tissue | Sample type | |||
TRPC5 | TRF2 | Affinity purification-mass spectrometry | Not used as a bait | Human | HEK293T | Cell lystaes | 20811636 |
(:
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