TRPC7 / interactors
- At a glance
- In detail
Name: Short transient receptor potential channel 7
(TRPC7)
Official Symbol: TRPC7
provided by HGNC
Function:
Thought to form a receptor-activated non-selective calcium permeant cation channel. Probably is operated by a phosphatidylinositol second messenger system activated by receptor tyrosine kinases or G-protein coupled receptors. Activated by diacylglycerol (DAG) (By similarity). May also be activated by intracellular calcium store depletion.
Source: Reorganizing the protein space at the Universal Protein Resource (UniProt)
Nucleic Acids Res. 40: D71-D75 (2012).
Species | External DB | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
Entrez Gene | UniprotKB | DIP | IntAct | MINT | BioGRID | STRING | IUPHAR-DB | KEGG | OMIM | |
Human
|
57113 | Q9HCX4 | DIP-35697N | Q9HCX4 | 121378 | Q9HCX4 | 492 | hsa:57113 | ||
Mouse
|
26946 | Q9WVC5 | 205082 | Q9WVC5 | mmu:26946 | |||||
Rat
|
282822 | Q6TPJ4 | 251859 | Q6TPJ4 | rno:282822 |
Biological Process:
- GO:0007411 : axon guidance
- GO:0006828 : manganese ion transport
- GO:0030168 : platelet activation
Source: The Gene Ontology Consortium. Gene ontology: tool for the unification of biology. Nat. Genet.. May 2000;25(1):25-9.
World Wide Web URL: http://www.geneontology.org/
World Wide Web URL: http://www.geneontology.org/
Disease:
No information in OMIM
Source: Online Mendelian Inheritance in Man, OMIM®. McKusick-Nathans Institute of Genetic Medicine,
Johns Hopkins University (Baltimore, MD), May, 2012.
World Wide Web URL: http://omim.org/
World Wide Web URL: http://omim.org/
Screening Validation: In vitro validation Validation: In vivo validation Characterization Functional consequence | top |
Screening | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Experimental screening | Non-experimental screening | Reference | ||||||||
TRP channel construct | Interactor source | |||||||||
TRP channel | Interactor | Method | Species | Region | Species | Organ/tissue | Sample type | |||
TRPC7 | Calmodulin | Inference | Prediction | 11290752 | ||||||
TRPC7 | Cav1.2 | Inference | Prediction | 21672930 | ||||||
TRPC7 | FKBP12 | Inference | Prediction | 15199065 | ||||||
TRPC7 | IP3R3 | Inference | Prediction | 11290752 | ||||||
TRPC7 | MxA | Inference | Prediction | 15757897 | ||||||
TRPC7 | PKG1 | Inference | Prediction | 21402151 | ||||||
TRPC7 | RNF24 | Inference | Prediction | 17850865 | ||||||
TRPC7 | TRPC1 | Inference | Prediction | 15972814 | ||||||
TRPC7 | TRPC3 | Inference | Prediction | 12032305 | ||||||
TRPC7 | TRPC5 | Inference | Prediction | 18356201 | ||||||
TRPC7 | TRPC6 | Inference | Prediction | 12032305 | ||||||
TRPC7 | TRPP1 | Inference | Prediction | 19812035 |
(:
click the arrow icon to show interactions only between the corresponding TRP channel and the interactor)
Screening Validation: In vitro validation Validation: In vivo validation Characterization Functional consequence | top |
Validation: In vitro validation | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Assay with recombinant proteins | Reference | |||||||||
TRP channel construct | Interactor construct | |||||||||
TRP channel | Interactor | Method | Species | Region | Expression system | Species | Region | Expression system | ||
TRPC7 | FKBP12 | Co-immunoprecipitation | Mouse | Full-length | Sf9 lysates | Human | Full-length | Sf9 lysates | 15199065 | |
TRPC7 | MxA | Fusion protein-pull down assay | Human | 3-195 | In vitro translation | Human | 572-662 | E. coli | 15757897 | |
TRPC7 | RNF24 | Fusion protein-pull down assay | Not specified | 3-195 | In vitro translation | Human | 98-148 | E. coli | 17850865 |
(:
click the arrow icon to show interactions only between the corresponding TRP channel and the interactor)
Screening Validation: In vitro validation Validation: In vivo validation Characterization Functional consequence | top |
Validation: In vivo validation | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Assay with endogenous proteins | Assay with overexpressed proteins | Reference | ||||||||
Cell or tissue | Cell or tissue | TRP channel construct | Interactor construct | |||||||
TRP channel | Interactor | Method | Species | Region | Species | Region | ||||
TRPC7 | Cav1.2 | Co-immunoprecipitation | Chick embryonic heart lysates | 21672930 | ||||||
TRPC7 | FKBP12 | Co-immunoprecipitation | Rat cerebral cortex | 15199065 | ||||||
TRPC7 | PKG1 | Co-immunoprecipitation | COS-7 | Mouse | Full-length | Human | Full-length | 21402151 | ||
TRPC7 | TRPC1 | Co-immunoprecipitation | HEK293 | 15972814 | ||||||
TRPC7 | TRPC3 | Co-immunoprecipitation | Sf9 | Mouse | Full-length | Human | Full-length | 12377790 | ||
TRPC7 | TRPC3 | Co-immunoprecipitation | Rat brain synaptome | 12377790 | ||||||
TRPC7 | TRPC3 | Co-immunoprecipitation | CHO | Mouse | 1-494 | Human | Full-length | 15537648 | ||
TRPC7 | TRPC3 | Co-immunoprecipitation | Rat ventricular myocytes | 18502908 | ||||||
TRPC7 | TRPC3 | Fluorescence resonance energy transfer | HEK293 | Mouse | Full-length | Human | Full-length | 12032305 | ||
TRPC7 | TRPC5 | Co-immunoprecipitation | Rabbit portal vein | 18356201 | ||||||
TRPC7 | TRPC6 | Co-immunoprecipitation | Sf9 | Mouse | Full-length | Mouse | Full-length | 12377790 | ||
TRPC7 | TRPC6 | Co-immunoprecipitation | Rat brain synaptome | 12377790 | ||||||
TRPC7 | TRPC6 | Fluorescence resonance energy transfer | HEK293 | Mouse | Full-length | Human | Full-length | 12032305 | ||
TRPC7 | TRPP1 | Co-immunoprecipitation | HEK293 | Mouse | Full-length | Human | 1-697 | 19812035 |
(:
click the arrow icon to show interactions only between the corresponding TRP channel and the interactor)
Screening Validation: In vitro validation Validation: In vivo validation Characterization Functional consequence | top |
Characterization | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Binding region mapping | Stoichiometry | Affinity (Kd) | Reference | |||||||
TRP channel | Interactor | |||||||||
TRP channel | Interactor | Method | Species | Region | Species | Region | ||||
TRPC7 | Calmodulin | Fluorescence probe labeling | Mouse | 769-798 | Not specified | Not determined | 19 nM | 11290752 | ||
TRPC7 | Calmodulin | Fusion protein-pull down assay | Mouse | 766-798 | Not specified | Not determined | 11290752 | |||
TRPC7 | IP3R3 | Fusion protein-pull down assay | Mouse | 766-798 | Human | 669-698 | 11290752 | |||
TRPC7 | MxA | Fusion protein-pull down assay | Human | 3-195 | Human | 572-662 | 15757897 | |||
TRPC7 | PKG1 | Co-immunoprecipitation | Mouse | 35-200 | Human | 105-360 | 21402151 | |||
TRPC7 | PKG1 | Co-immunoprecipitation | Mouse | 35-200 | Human | 1-360 | 21402151 |
(:
click the arrow icon to show interactions only between the corresponding TRP channel and the interactor)
Screening Validation: In vitro validation Validation: In vivo validation Characterization Functional consequence | top |
Functional consequence | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
TRP channel | Interactor | Method | Post-translational modification | Subcellular trafficking | Activity | Reference | ||||||
TRPC7 | PKG1 | In vitro PTM assay | Phosphorylation | 21402151 | ||||||||
TRPC7 | TRPP1 | Calcium measurement | Activation | 19812035 |
(:
click the arrow icon to show interactions only between the corresponding TRP channel and the interactor)