TRPM3 / interactors
- At a glance
- In detail
Name: Transient receptor potential cation channel subfamily M member 3
(TRPM3)
Official Symbol: TRPM3
provided by HGNC
Function:
Calcium channel mediating constitutive calcium ion entry. Its activity is increased by reduction in extracellular osmolarity, by store depletion and muscarinic receptor activation.
Source: Reorganizing the protein space at the Universal Protein Resource (UniProt)
Nucleic Acids Res. 40: D71-D75 (2012).
Species | External DB | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
Entrez Gene | UniprotKB | DIP | IntAct | MINT | BioGRID | STRING | IUPHAR-DB | KEGG | OMIM | |
Human
|
80036 | Q9HCF6 | 123085 | Q9HCF6 | 495 | hsa:80036 | 608961 | |||
Mouse
|
226025 | Q5F4S6 | 230459 | Q5F4S6 | mmu:226025 | |||||
Rat
|
309407 | A7L637 | 259372 | A7L637 | rno:309407 |
PPI pairs:
Biological Process:
No information in Gene Ontology
Source: The Gene Ontology Consortium. Gene ontology: tool for the unification of biology. Nat. Genet.. May 2000;25(1):25-9.
World Wide Web URL: http://www.geneontology.org/
World Wide Web URL: http://www.geneontology.org/
Disease:
No information in OMIM
Source: Online Mendelian Inheritance in Man, OMIM®. McKusick-Nathans Institute of Genetic Medicine,
Johns Hopkins University (Baltimore, MD), May, 2012.
World Wide Web URL: http://omim.org/
World Wide Web URL: http://omim.org/
Screening Validation: In vitro validation Validation: In vivo validation Characterization Functional consequence | top |
Screening | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Experimental screening | Non-experimental screening | Reference | ||||||||
TRP channel construct | Interactor source | |||||||||
TRP channel | Interactor | Method | Species | Region | Species | Organ/tissue | Sample type | |||
TRPM3 | Calmodulin | Inference | Prediction | 22451665 | ||||||
TRPM3 | S100A10 | Inference | Prediction | 22451665 | ||||||
TRPM3 | TRPM1 | Inference | Prediction | 21278253 | ||||||
TRPM3 | UBC | Affinity purification-mass spectrometry | Not used as a bait | Human | HEK293T | Cell lystaes | 21890473 |
(:
click the arrow icon to show interactions only between the corresponding TRP channel and the interactor)
Screening Validation: In vitro validation Validation: In vivo validation Characterization Functional consequence | top |
Validation: In vitro validation | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Assay with recombinant proteins | Reference | |||||||||
TRP channel construct | Interactor construct | |||||||||
TRP channel | Interactor | Method | Species | Region | Expression system | Species | Region | Expression system | ||
TRPM3 | Calmodulin | Fluorescence probe labeling | Human | 35-124 | E. coli | Not specified | Not specified | Not specified | 22451665 | |
TRPM3 | Calmodulin | Fluorescence probe labeling | Human | 291-382 | E. coli | Not specified | Not specified | Not specified | 22451665 | |
TRPM3 | S100A10 | Fluorescence probe labeling | Human | 35-124 | E. coli | Human | Full-length | E. coli | 22451665 | |
TRPM3 | S100A10 | Fluorescence probe labeling | Human | 291-382 | E. coli | Human | Full-length | E. coli | 22451665 |
(:
click the arrow icon to show interactions only between the corresponding TRP channel and the interactor)
Screening Validation: In vitro validation Validation: In vivo validation Characterization Functional consequence | top |
Validation: In vivo validation | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Assay with endogenous proteins | Assay with overexpressed proteins | Reference | ||||||||
Cell or tissue | Cell or tissue | TRP channel construct | Interactor construct | |||||||
TRP channel | Interactor | Method | Species | Region | Species | Region | ||||
TRPM3 | TRPM1 | Co-immunoprecipitation | HEK293 | Mouse | Full-length | Rat | Full-length | 21278253 | ||
TRPM3 | TRPM1 | Fluorescence resonance energy transfer | HEK293 | Mouse | Full-length | Rat | Full-length | 21278253 |
(:
click the arrow icon to show interactions only between the corresponding TRP channel and the interactor)
Screening Validation: In vitro validation Validation: In vivo validation Characterization Functional consequence | top |
Characterization | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Binding region mapping | Stoichiometry | Affinity (Kd) | Reference | |||||||
TRP channel | Interactor | |||||||||
TRP channel | Interactor | Method | Species | Region | Species | Region | ||||
TRPM3 | Calmodulin | Fluorescence probe labeling | Human | 291-382 | Not specified | Not determined | 22451665 | |||
TRPM3 | Calmodulin | Fluorescence probe labeling | Human | 35-124 | Not specified | Not determined | 22451665 | |||
TRPM3 | S100A10 | Fluorescence probe labeling | Human | 291-382 | Human | Not determined | 22451665 | |||
TRPM3 | S100A10 | Fluorescence probe labeling | Human | 35-124 | Human | Not determined | 22451665 |
(:
click the arrow icon to show interactions only between the corresponding TRP channel and the interactor)